All codes are available upon request by using the Contact Us button. Please refer to the specific code you are interested in and indicate the purpose.
Codes for 2-Photon Microscopy Ca2+ Imaging:
ROI Selection tool (Matlab Custom Code, by Zeke Barger)
, used in Publications: Ellwardt, Pramanik et al. 2018
Peak detection algorithm of Ca2+ 2-Photon Microscopy Datasets (IGOR Plugin, by Hirofumi Watari)
, used in Publications: Ellwardt, Pramanik et al. 2018
Codes for Optic Fiber Ca2+ Measurements:
Onset and Offset detection of Slow Ca2+ Waves in Optic Fiber based Datasets (Matlab Custom Code, adapted from Seamari et al. 2007, by Andrea Kronfeld), used in Publications: Schwalm et al. 2017
Codes for fMRI:
Find Global Maximum Voxels in F-Maps (Matlab Custom Code, by Hendrik Backhaus)
, used in Publications: Schwalm et al. 2017
Create mean hemodynamic response upon stimuli of most active voxels (Matlab Custom Code, by Hendrik Backhaus, used in Publications: Schwalm et al. 2017